Current Analytical Chemistry - Online First
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Disease Biomarkers and their Utility in LC-MS and NMR Studies: An Overview
Available online: 18 July 2025More LessIntroductionTo evaluate early disease diagnosis, disease progression, medication response, disease prevention, and therapeutic target selection, biomarker discovery is a crucial tool. It is of paramount clinical importance to identify biomarkers using various detection techniques and to characterize these biomarkers. The combination of proteomics, metabolomics, LC-MS, and NMR holds great promise for the easy identification of biomarkers by mapping the early biochemical alterations in illnesses. Analyzing a complex biological system calls for a robust and intelligent method. As a result of its adaptability, clarity, accuracy, speed, and increased productivity, LC-MS has become the gold standard approach for biomarker research. Proteins and nucleic acids are examples of big molecules that have been studied using the same approach. NMR spectroscopy enables the nondestructive detection and measurement of a vast array of novel metabolite biomarkers in biological fluids and tissues. Thus, NMR & LC-MS-based metabolomics are a huge help in illness diagnosis and biomarker identification.
ObjectivesThis article discusses the present function of LC-MS and NMR in developing biomarkers for disease diagnosis and strategies for identifying biomarkers in various diseases.
MethodsThe methodology employed is based on the extraction of data (2002-2024) from various databases such as PubMed, Google Scholar, Web of Science, and Google with strict inclusion and exclusion criteria.
ResultsDrug discovery, early disease diagnosis, and the identification of impaired metabolic reactions have all been made more efficient by merging mass spectrometry and 1H NMR spectroscopic studies with comprehensive statistical data analysis.
ConclusionEmerging high-throughput technologies for biomarker detection in disease diagnostics are the subject of this review. To improve therapy and illness prevention, personalization will be essential.
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Network Pharmacology Analysis on the Anticoagulant Effect of the Chemical Constituents of Paeoniae Radix Rubra on Blood Stasis Syndrome in Rats
Authors: Siwen Pan, Chunlei Yu and Haixue KuangAvailable online: 01 July 2025More LessIntroductionIn Traditional Chinese Medicine (TCM), BSS refers to impaired circulation or stagnation of blood flow and formation of bruises. The primary therapeutic strategy to treat BSS involves invigorating blood circulation. PRR is a widely used TCM herb for treating acute and critical diseases caused by BSS. However, the anticoagulant effects of different compounds of PRR on BSS remain elusive. The aim of the study was to investigate the pharmacological role of different chemical constituents of Paeoniae Radix Rubra (PRR) in the modulation of anticoagulation in Blood Stasis Syndrome (BSS). This study aimed to analyze the therapeutic effect of PRR on BSS and to assess the ameliorative effect of different chemical constituents of PRR on blood circulation, clotting time, and platelet aggregation in rats with acute BSS.
MethodsTraditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP) was used to screen the targets of PRR, and genes causing BSS were predicted using PharmGKB, OMIM, and TTD databases. Intersected genes between PRR and BSS targets were visualized in Venn diagrams. Core target networks of Protein-Protein Interaction (PPI) and cross-targets were constructed using Cytoscape 3.7.1, and the cross-targets were enriched using the Database for Annotation, Visualization, and Integrated Discovery (DAVID) database. Furthermore, the effects of PRR on platelet aggregation, plasma viscosity, and whole blood viscosity in the rats with BSS were examined by blood rheology and other methods. The serum levels of Endothelin-1 (ET-1), Nitric Oxide (NO), Thromboxaneb2 (TXB2), and 6-keto-Prostaglandin F1 α (6-keto-PGF1α) in the rats were measured by the Enzyme-Linked Immunosorbent Assay (ELISA) method.
ResultsThe main active compounds of PRR, including total glycosides, flavonoids, and polysaccharides, were identified using the TCMSP database. A total of 31 cross-targets were obtained from the intersection between 129 active targets of PRR and 345 causative genes of BSS. PPI network identified genes such as Albumin (ALB), SRC Proto-Oncogene, Non-Receptor Tyrosine Kinase (SRC), and AKT Serine/Threonine Kinase 1 (AKT1) as the core targets of PRR in alleviating BSS. Enrichment analysis showed that the common targets were mainly associated with several biological processes, including lipid and atherosclerosis, adherens junction, and focal adhesion. Following the intervention with PRR extract, the whole blood viscosity and plasma viscosity were reduced, and platelet aggregation was inhibited in the model rats in comparison to the model group. Moreover, PRR treatment also promoted thrombin time (TT), prothrombin time (PT), and Activated Partial Thromboplastin Time (APTT), increased the level of NO and 6-keto-PGF1α, but reduced the level of Fibrinogen content (FIB) and ET-1 and TXB2 in the serum of the model rats.
DiscussionThe present research systematically explored the anticoagulant effect of the chemical constituents of PRR on BSS in rats, applying network pharmacology analysis.
ConclusionThe current findings provided a theoretical foundation for the pharmacological basis of using PRR in the management of BSS.
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Establishment of a RiskScore Model Based on Oxidative Stress-related Features to Guide the Treatment of Liver Hepatocellular Carcinoma
Authors: Juanjuan Cui, Xinwei Zhang and Zhiyong YuanAvailable online: 23 June 2025More LessIntroductionOxidative stress (OS) is a crucial factor promoting the progression of liver hepatocellular carcinoma (LIHC). This study was designed to develop an OS-based RiskScore model.
MethodsPublicly available RNA-seq data and clinical data of LIHC patients, as well as an OS-related gene set, were collected. The differentially expressed genes (DEGs) were calculated, and functional enrichment analysis was performed. Then, a RiskScore model was established, and Kaplan-Meier survival and receiver operating characteristic analyses were performed. Immune infiltration was analyzed, and tumor cell migration and invasion were detected.
Results4,118 DEGs were identified in the TCGA-LIHC cohort, while 1,632 DEGs were recognized in the ICGC cohort. The upregulated DEGs were closely related to the cell cycle pathway, while the downregulated DEGs were linked to the metabolic pathway. A 4-gene RiskScore model accurately divided patients into high- and low-risk groups, showing strong classification effectiveness. Patients in the high-risk group exhibited worse prognosis, elevated TIDE scores, frequent p53 mutations, and higher immune cell infiltration. In vitro experiments confirmed that these model genes were overexpressed in tumor cells as risk factors, with SPP1 notably influencing tumor cell migration and invasion. Furthermore, by combining the RiskScore with other clinical features, we developed a nomogram that precisely guides survival assessment in LIHC. Finally, the association of RiskScore with OS and multiple metabolic pathways was noticed.
DiscussionThis study proposes a novel RiskScore model for LIHC based on the OS feature, which still requires further verification.
ConclusionWe establish an OS-related risk model to guide the treatment of LIHC.
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From Synthesis and Structural Characterization to Anti-inflammatory Activity Evaluation and Network Pharmacology Analysis: Revealing the Potential Anti-inflammatory Mechanisms of Andrographolide Sulfonated Derivative Mixture
Authors: Difa Liu, Bingfeng Huang, Renqing Zhong, Fangfang Liu, Wenbei Chen, Zhuyuan Liao and Wencai YeAvailable online: 19 June 2025More LessIntroductionInflammatory disorders profoundly affect quality of life, with existing treatments often limited by resistance, adverse effects, and administration challenges. Andrographis paniculata, highly esteemed for its potent anti-inflammatory efficacy, harbors andrographolide, a pharmacologically active compound whose clinical utilization is impeded by its limited aqueous solubility and reduced oral bioavailability.
MethodsTo address these limitations, we synthesized a mixture of andrographolide sulfonated derivatives to improve solubility. The major derivatives were isolated and analyzed qualitatively by NMR and UHPLC-Q/TOF-MS. Their anti-inflammatory effects were evaluated using a zebrafish inflammation model, and the most active derivatives were further analyzed through network pharmacological analysis to uncover the underlying anti-inflammatory mechanisms.
ResultsThe synthesis of andrographolide sulfonate derivatives enhanced andrographolide’s solubility. Structural characterization of the seven predominant derivatives was performed. Testing in a zebrafish model revealed that andrographolide and three sulfonated derivatives substantially reduced inflammation. Network pharmacology analysis identified significant connections in the “active compounds-inflammation targets-pathways-therapeutic effects” network, highlighting important biological processes and six key molecular targets (PRKCA, PRKCB, MAPK14, IL6, CASP3, and CDK4) associated with the anti-inflammatory actions of these derivatives.
DiscussionThis integrative chemical–bioinformatic workflow significantly enhances the solubility of andrographolide while preserving its anti-inflammatory potency and identifying six key inflammatory targets. It therefore provides a transferable blueprint for optimising hydrophobic natural products and accelerating anti-inflammatory drug discovery.
ConclusionOverall, this study not only improves the solubility and maintains the anti-inflammatory efficacy of andrographolide through sulfonation but also elucidates the underlying potential mechanisms of action of its sulfonated derivative mixture.
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Efficient Extraction Coupled with Liquid Chromatography for the Analysis of Toxic Alkaloids in Wudang Taoist ink
Authors: Yongheng Zhao, Mei Zeng, Yongchang Jin, Zhixiong Jin and Xu LingAvailable online: 18 June 2025More LessIntroductionThe alkaloids present in Wudang Taoist ink are both potent and toxic. Thus, it is essential to assess their concentrations. In this study, mesaconitine, aconitine, and strychnine were used as indicators of safety.
MethodsThe extraction and quantification of these alkaloids were accomplished through ethanol heating reflux extraction and high-performance liquid chromatography (HPLC), utilizing Radix Aconiti Preparata, Radic Aconiti Kusnezoffii Preparata, and Processed Semen Strychni as raw materials. Guided by single-factor experiments, we employed response surface methodology to optimize the extraction process. The primary objective of this optimization was to maximize the extraction efficiency of total aconitine (which includes mesaconitine and aconitine) and strychnine, while considering key factors such as ethanol concentration, material-to-liquid ratio, and extraction time. Using the optimized extraction protocol, we successfully extracted and quantified mesaconitine, aconitine, and strychnine content in Wudang Taoist ink.
ResultsThe optimal conditions included an ethanol concentration of 77.9%, a liquid-to-material ratio of 8.85:1 (mL/g), and an extraction time of 135 minutes. This approach demonstrated high accuracy and precision.
DiscussionValidation and Regulatory Compliance: The optimized protocol ensures reliable quantification of toxic alkaloids, complying with Chinese Pharmacopoeia safety thresholds. This methodology supports scalable toxin control in Radix Aconiti preparations.
ConclusionThe alkaloid content in the ink meets the requirements specified in the Chinese Pharmacopoeia. The established response surface methodology is both reliable and reproducible, making it applicable for controlling toxic components in Radix Aconiti as well as in Wudang Taoist ink.
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Biodiversification of Phytocompound in Hydrocotyle rotundifolia Originating from Selected Biogeographical Regions of the Indian Subcontinent
Available online: 03 June 2025More LessIntroductionGeographical location plays a critical role in the distribution and potency of medicinal plants. Climate, soil composition, and other factors significantly affect the chemical composition of plants and their medicinal properties. This study aims to investigate how the expression of biodiversity manifests in the phytocompound of Hydrocotyle rotundifolia from different biogeographical locations across the Indian subcontinent.
MethodsThe study analyzed the amount of genistein in the aerial part of H. rotundifolia across three different biogeographical zones using a precise, simple, and highly reproducible validated HPTLC method and adopted different standard spectroscopic methods for soil characterization.
ResultsThe quantity of genistein was found to be highest (0.74%) in the plants growing in the soil of the northeast region, where the available nitrogen (23.45 Kgha-1) and potassium (267.354 Kgha-1) were also highest among the three regions.
DiscussionCorrelating the soil characters and climatic factors, it may be concluded that the Northeast region, with its favorable soil conditions and climatic support, is the ideal location for growing this plant and producing genistein.
ConclusionThis information is invaluable for applications in agriculture, pharmaceuticals, and environmental studies because understanding the distribution and concentration of phytocompounds across different locations can have numerous applications in these fields.
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AI-Enhanced Prediction Tools and Sensor Integration in Advanced Analytical Chemistry Techniques
Authors: Mukesh Kumar, Aniket Nandi, Ramji Lal Yadav, Ghanshyam Das Gupta and Kalicharan SharmaAvailable online: 23 May 2025More LessArtificial intelligence is “a technical and scientific field devoted to the engineered system that generates outputs such as content, forecasts, recommendations or decisions for a given set of human-defined objectives”. Combination of AI and analytical techniques will have huge potential to transform decision-making processes and promote innovation across sectors. AI enhances data detection, segmentation, and image resolution with convolutional neural networks (CNNs) excelling in analyzing complex image datasets for material characterization. Machine learning integrates with different methods like gas chromatography (GC), high-performance liquid chromatography (HPLC), gas chromatography-mass spectrometry (GC-MS), liquid chromatography-mass spectrometry (LC-MS), ultraviolet (UV), and infrared (IR) spectroscopy, mass spectrometry (MS), colorimetry, and biosensing techniques. This review provides an overview of AI-based models and sensors of analytical techniques and highlighting chemometric tools in UV and IR spectroscopy for improved accuracy and data interpretation. Real-time AI analysis of sensor data enables immediately useful conclusions, which is a revolution in a variety of fields, including environmental research and pharmaceuticals. Advanced techniques like spectroscopy, chromatography, and mass spectrometry are given an updated aspect by the use of AI and sensors. This may improve these steps, increasing accuracy and efficiency and enabling quicker and more precise analysis of complex compounds. Multi-dimensional sensor data, which is frequently too complicated for conventional techniques, may be analyzed and processed using AI. This improves the study by enabling further understanding and more thorough analysis. Overall, this paper explores AI-based tools and sensors in analytical techniques and highlights their role in error reduction and process automation.
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Characterization of Tragacanth Gum as Biomedical and Food Adjuvant: Determination of Temperature-Dependent Coefficients of Viscosity and Surface Tension
Available online: 15 May 2025More LessIntroductionGum tragacanth is used as a substance to increase viscosity, stabilize, emulsify, and suspend other substances. In recent years, it has emerged as a promising therapeutic agent for tissue engineering, regenerative medicine, cosmetics, and food adjuvants. Therefore, characterizing its temperature-dependent viscosity is crucial for its pilot-scale applications. Therefore, the main objective of the present work is the characterization of the temperature dependent coefficient of viscosity and surface tension of gum tragacanth to establish it as an alternative source of natural gums for commercial applications.
MethodThe effect of temperature on the rheological behaviours of the polymeric solution was studied. Furthermore, the Arrhenius, Gibbs–Helmholtz, Frenkel–Eyring, and Eotvos equations were utilized to compute the temperature coefficient, viscosity, surface tension, activation energy, Gibbs free energy, Reynolds number, and entropy of fusion, respectively.
ResultsIt was determined that the activation energy of gum tragacanth was 1559.70 kJ/mol. Changes in entropy and enthalpy were found to be 56.34 and 1122.80 kJ/mol, respectively. The Reynold number's computed value was 0.0053.
Discussion: As the temperature increased, there was a noticeable decrease in both surface tension as well as apparent viscosity. In contrast to Albizia lebbac gum, the current study found that solutions made from Gum Tragacanth seed polymers had a smaller impact by changes in temperature.
ConclusionGum tragacanth polymer's exceptional physicochemical qualities make it a promising excipient for drug formulation in the years to come, paving the way for its widespread use in food, cosmetics, and pharmaceutical industries.
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Development of an Adhesive Solution for a Modified ISFET with a Traditional Ion-selective PVC Membrane
Available online: 12 May 2025More LessIntroductionIon-sensitive field-effect transistors (ISFETs) can measure the concentration of specific ions in solutions, by attaching ion-sensing membranes proposed for ion-selective electrodes (ISEs) to their gate surfaces. Numerous organic ion-sensing membranes for ISEs have been developed. However, the adhesion between the ion-sensing membranes and the gate surfaces is poor, therefore, adversely affecting the potential responses of ISFETs.
MethodsNew adhesive solutions to attach the ion-sensing polyvinyl chloride (PVC) membranes to the gate surfaces of ISFETs have been developed. The proposed adhesive solutions were made in tetrahydrofuran (THF) from polymer blends containing PVC and paraloid B-72 in different ratios.
ResultsIt was found that the adhesive solution with a composition ratio of PVC: Paraloid B-72 = 10:90 provided particularly good adhesion and the best slope of the potential response to Na+-activity change. The best ion selectivity for the Na+ ion was exhibited by ISFET with the adhesive solution having a composition ratio of PVC: Paraloid B-72 = 20:80.
DiscussionThe results of the tensile test indicated that the PVC components in the adhesive solutions may not be directly involved in adhesion to the gate surface of the ISEFTs. The adhesive solution consisting of only PVC content provided the worst slope of the potential response to Na+-activity change.
ConclusionThe ion-sensing PVC membranes were stably attached using the proposed adhesive solutions on the gate surfaces of the ISFETs. By using the proposed adhesive solution, the ISFETs with the ion-sensing PVC membranes showed good potential responses.
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Application of UPLC-Q-Exactive-MS Technology Combined With Network Pharmacology to Investigate the Mechanism of Action of Aster Tataricus L. Extract in the Treatment of Drug-induced Liver Injury
Authors: Tong Zhou, Yi-Fan Zhang, Jian-Cheng Li, Le-Yan Hu, Chao-Yuan Li and Li-Hong WangAvailable online: 05 May 2025More LessObjective/IntroductionTo investigate the pharmacodynamic material basis and potential mechanism of Aster tataricus L. total flavonoids (ATF) in treating isoniazid (INH) and rifampicin (RIF)-induced drug-induced liver injury (DILI) in C57BL/6 mice
MethodsATF was extracted using ultrasonic extraction and purified with AB-8 macroporous adsorbent resin. A DILI model was established in male C57BL/6 mice using INH and RIF. Histopathological changes were assessed by HE staining, and serum levels of ALT and AST, as well as liver levels of SOD, MDA, GSH-Px, and T-AOC, were measured. UPLC-Q-Exactive-MS was used to analyze ATF and serum components in DILI mice, followed by network pharmacology analysis and molecular docking validation.
ResultsTThe extraction rate of ATF was 31.9%, and the purification rate was 83.1%. ATF treatment alleviated cell necrosis and inflammation, reduced organ index, and normalized biochemical indices, with the best effects observed at low doses. UPLC-Q-Exactive-MS identified 15 blood-entry components, 9 prototype components, and 4 core targets with high binding energies.
DiscussionEfficient extraction and purification methods for total flavonoids from Aster tataricus L. were developed. Their pharmacological basis and potential targets for treating DILI were identified, providing a theoretical basis for DILI treatment.
ConclusionThis study provides a theoretical basis for the treatment of DILI using ATF. The developed extraction and purification methods efficiently obtained ATF, and its pharmacological basis and potential targets were identified. This research offers a new direction for exploring natural products from Traditional Chinese Medicine for DILI treatment.
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Development of Molecular Subtypes and a Prognostic Model for Ovarian Cancer Based on Lipid Homeostasis Features
Authors: Xuejiao Cao, Ye Cao and Wenhua TanAvailable online: 02 May 2025More LessIntroductionThis study aimed to explore the prognostic role of lipid homeostasis in Ovarian Cancer (OV). OV is a lethal female malignancy that is difficult to be diagnosed at an early stage. Emerging evidence suggests that lipid homeostasis dysregulation contributes to tumorigenesis and progression, yet its prognostic implications in OV remain unclear.
MethodsRNA-seq data and scRNA-seq data of OV were collected from public databases. The MSigDB database provided the Lipid Homeostasis-related Gene (LHSRGs) set. The OV samples were clustered using the “ConsensusClusterPlus” package, followed by identifying Differentially Expressed Genes (DEGs) between the molecular subtypes using “limma” package. Subsequently, prognostic genes were selected through univariate Cox and LASSO Cox regression analyses, and multivariate stepwise regression analysis was used to construct a risk model. The CIBERSORT, single sample GSEA (ssGSEA), and MCP-counter methods were used to assess the relation between the RiskScore and immune cell infiltration. The expression of the identified key prognostic genes in different OV cell types was analyzed by performing single-cell analysis on OV samples using the Seurat package. Finally, functional experiments, including qPCR, CCK-8, wound healing, and transwell assays, were carried out for validating the key gene expression, cell viability, migration, and invasion.
ResultsWe first screened 14 prognostic LHSRGs and stratified OV into two molecular subtypes (C1 and C2). Using the DEGs in C1 and C2, 9 prognostically critical genes (ARRDC2, CCDC80, VSIG4, PI3, ATP1A3, MRAP2, GMPR, CD3D, and GBP5) were screened to develop a risk model with a strong predictive performance for OV. Notably, high-risk patients showed poor outcomes. RiskScore was significantly negatively correlated with the infiltration of multiple immune cells (e.g., cancer-associated fibroblasts, activated CD4 and CD8 T cells, etc.). Single-cell analysis revealed that the proportion of T cell types in OV samples was increased and that fibroblasts, epithelial cells, and macrophages may regulate lipid homeostasis. In vitro assays demonstrated that knocking down the model gene ARRDC2 affected the viability, migration, and invasion of the OV cells.
DiscussionIn the present study, a RiskScore model incorporating a 9-gene signature was proposed to stratify OV patients into high/low-risk categories, and patients with different risk types displayed the disparity in the distribution of clinicopathological features and the clinical outcome, which provided a reference for the personalized therapy in OV.
ConclusionIn summary, we established a novel 9-LHSRG signature for OV prognosis and characterized the immune infiltration landscape in OV. These findings contributed to more effective risk stratification for OV patients, improving the diagnostic accuracy and the personalized treatment of OV.
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Machine Learning Methods for Mango Classification Based on the Green Technology of Near-infrared Spectroscopy
Authors: Xuemei Lin, Can Hou, Haiwei Yao, Qiushuang Mo, Zhanhong Liang and Shaoyong HongAvailable online: 29 April 2025More LessIntroductionMango is a kind of popular fruit in consumer market, which is rich in nutrients, fiber, and vitamins. People have different taste preferences for different varieties of mango. Near-infrared (NIR) spectroscopy is a non-destructive, green, and economical technology that serves for rapid detection. Several machine learning methods are applied for deep mining from the detected NIR data. It is beneficial for consumers to give rapid recognition of the cultivar of mangos.
MethodsPartial least squares discrimination analysis (PLS-DA), support vector machine (SVM), back propagation neural network (BPNN), and convolutional neural network (CNN) are taken into consideration for model training. Grid search on parametric scaling is carried out for model optimization based on these methods. A special design of a dual-convolutional neural network (dCNN) is proposed and validated.
ResultsFor the comparison of different methods, the optimal SVM, PLS-DA, BPNN, and CNN methods observed the discrimination accuracy of 86.49%, 83.68%, 85.61%, and 88.60% for model training, respectively. The proposed dCNN method performs better in the model testing progress than all of the conventional methods, observing the highest accuracy of 89.34%.
DiscussionResults reveal that most of the machine learning methods are effective as the chemometric support to the NIR technology in the application of mango classification. They are prospectively applied to other analytes for data mining in the field.
ConclusionThe proposed dCNN architecture is validated as feasible to improve the model prediction effect, which is expected to help widen the application of the green and economical NIR technology.
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Predictive Analysis of Rosmarinus officinalis L. Quality Marker (Q-Marker) Based on Chemical Composition, Activity and Network Pharmacology
Authors: Tianyou Li, Ziyi Tang, Jinru Zhu, Changxin Ye, Huihui Xu, Wei Ge, Xueqing Ji, Pin Lv, Yan Zhang and Yun HuangAvailable online: 25 April 2025More LessRosmarinus officinalis L. is a long-honored medicinal and edible aromatic plant extensively employed in the food, pharmaceutical, and spice industries. It is rich in various bioactive compounds, including flavonoids, terpenes, phenylpropanoic acids, quinones, and steroids, which exhibit a range of effects such as antimicrobial, anti-inflammatory, antioxidant, antitumor, hypoglycemic, hypolipidemic, hepatoprotective, and nephroprotective properties. To further explore the application potential of Rosmarinus officinalis, we predicted the quality marker (Q-Marker) based on the measurability of chemical constituents, traditional medicinal properties, and effectiveness. This approach was informed by research on the components, biological activities, and mechanisms of action, followed by network pharmacology analysis. Ultimately, 17 practical components were selected as potential biomarkers, including carnosic acid, carnosol, rosmanol, isorosmanol, epirosmanol, 7-methoxyrosmanol, 7-ethoxyrosmanol, rosmaridiphenol, rosmadial, rosmarinic acid, 1,8-cineole, rosmarinine, royleanone, horminone, homovanillic acid, ferruginol, and cryptotanshinone. Most of these compounds belong to the categories of terpenoids and organic acids. Through enrichment analysis, we identified the targets and pathways of these components in various diseases, such as microbial infection, cancer, apoptosis, oxidative stress, and abnormal glycolipid metabolism. This integrated approach that combines plant components, big data, and pharmacology for marker screening is more rational. The results provide a reference for the development, research, and quality evaluation of rosemary resources.
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A Brief Account of the Technology Significance of Synchrotron Radiation: A State-of-the-art Angle-Resolved Photoemission Spectroscopy (ARPES)
By Mina MagdyAvailable online: 25 April 2025More LessThis paper highlights the exploitation of the cutting-edge technology of synchrotron radiation in the analytical strategies for various materials. Synchrotron radiation is dedicated to the emission of ultra-relativistic electrons as they travel around magnetic fields within a vacuum chamber. The architecture of a synchrotron facility depends on advancements in the relevant technology. Synchrotron radiation offers outstanding properties, including high brightness, high polarization, and pulsed-light emission. The distinctive features of high-resolution monochromatization and submicron resolution of synchrotron beamlines allow for a continuous band of the electromagnetic spectrum. The synchrotron beamlines are specifically designed for dedicated applications that fall into one of four aspects: spectroscopy, diffraction, scattering, and imaging. Such synchrotron-based methods are highly useful for investigating the composition, structure, morphology, and physico-chemical properties of materials. Among these methods, angle-resolved photoemission spectroscopy (ARPES) serves as a good experimental probe for mapping the electronic structure as a function of energy and momentum in crystalline solids and thin films. ARPES offers valuable insights into the physical properties of various material systems, including topological materials, high-temperature superconductors, graphene, transition metal dichalcogenides, heterostructures, and buried interfaces. Recent technological developments have expanded the scope of ARPES: spin-resolved ARPES, time-resolved ARPES, soft X-ray ARPES, and nano-resolved ARPES.
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Identification and Characterization of Bioactive Compounds from a Marine Bivalve Clam Marcia hiantina via Mass Spectrometry Techniques
Available online: 24 April 2025More LessIntroductionBioactive compounds with unique functional properties derived from marine bivalves have been gaining increasing attention. Marcia hiantina is a bivalve clam found in many coastal regions of the Philippines but is underutilized despite its nutritional value. The study aimed to isolate bioactive compounds from M. hiantina using a mass spectrometry-guided technique to separate target analytes and characterize their biological activities.
MethodsBioactive fractions were detected by combining Liquid Chromatography-Mass Spectrometry (LC-MS) and High-Performance Liquid Chromatography (HPLC) with biological assays. The bioactive compounds were subsequently identified using Ultra-High-Performance Liquid Chromatography-Elevated Energy Mass Spectrometry (UHPLC–MSE).
ResultsA UHPLC-MSE analysis of the isolate revealed polymeric Tryptophan (Trp) and its metabolites. The M. hiantina-derived peptide exhibited inhibitory effects on the proliferation of human breast cancer cells (MCF-7), with an IC50 value of 95.20 ± 0.11 μg/mL, measured by 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay. Moreover, the peptide also inhibited the growth of both Gram-positive and Gram-negative bacterial strains and demonstrated strong antioxidant potential as a 2,2-diphenyl-1-picrylhydrazyl (DPPH) scavenger (73.54% at 2.5 mg/mL).
DiscussionThe presence of Trp metabolites, including indole and indole-3-propionic acid in M. hiantina may result from the host-microbe interactions, or be influenced by environmental stress, as Trp requirements in clams increase under oxidative conditions, reflecting their adaptation to stressors like intermittent hypoxia and pollutants.
ConclusionThis study revealed that M. hiantina is a new source of bioactive compounds, and can be a promising novel ingredient in functional foods promoting health and well-being.
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Identifying Key Genes for Neurobehavioral Disorders Caused by Long-Term Sleep Deprivation
Authors: Junquan Chen, Jingyu Hou, Xuwei Chen, Wenhua Fan and Peng SunAvailable online: 18 April 2025More LessIntroductionThis study aims to identify key genes by analyzing gene expression changes induced by prolonged sleep deprivation (SD) and to explore their potential relationship with immune regulation and neurobehavioral disorders.
MethodsMicroarray data of SD at different time points were obtained to screen differentially expressed genes (DEGs). The functions of DEGs and the biological pathways involved were explored. Additionally, significant DEGs were screened as key genes for SD. Finally, immune scores and immune cell scores were calculated. The relationships between key genes, immune scores, and immune-related pathways were explored.
ResultsThe relevant DEGs were identified, including USP32P1, TREML1, PF4V1, GPR146, DEFA1B, and CLEC1B. Among these, CLEC1B, GPR146, PF4V1, and TREML1 were upregulated in SD samples, while DEFA1B and USP32P1 were downregulated. These key genes were involved in the biological processes, including DNA repair, KRAS signaling, and the PI3K-AKT signaling pathway. Furthermore, PF4V1, GPR146, TREML1, and CLEC1B exhibited a significant negative correlation with immune scores and were closely associated with various immune regulatory pathways, like antigen processing and presentation, B cell receptor signaling, and T cell receptor signaling pathways.
DiscussionThis study, based on microarray data, investigated the dynamic changes in gene expression induced by SD and their underlying mechanisms. Six key genes with differential expression levels and distinct enriched biological processes were identified.
ConclusionThe altered expression of 6 identified genes induced by SD and their underlying molecular mechanisms may provide a foundation for the early diagnosis and personalized treatment of SD-related diseases.
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Carbon Dots for Anti-corrosion: A Review Describing in Detail the Application and Mechanism of Corrosion Inhibitors
Authors: Jiaojiao Cao and Bokai LiaoAvailable online: 10 April 2025More LessCorrosion is a spontaneous and unavoidable process that reduces the service life of materials. Most industries suffer from corrosion of manufacturing equipment. To effectively protect metals from corrosion, various strategies have been developed. Among these, the use of corrosion inhibitors is a widely adopted technique. Many commercial inorganic and organic substances have been proven to be effective inhibitors. However, most of them are toxic and pose environmental threats during their synthesis. In recent years, Carbon Dots (CDs) have gained widespread application as a green aqueous-phase corrosion inhibitor due to their eco-friendly properties and good water solubility. This article provides a comprehensive review on the research progress on CDs, systematically exploring the use of heteroatom-doped CDs as corrosion inhibitors for carbon steel, copper, and their alloys. The discussion includes synthesis methods, various morphologies and structures of CDs, corrosion resistance performance, kinetics, thermodynamics, quantum computational chemistry, and inhibition mechanisms. Additionally, the challenges, recommendations, and opportunities in this field are addressed. Through this review, readers will gain a deeper understanding of the potential of CDs as corrosion inhibitors, inspiring more scientists to make valuable contributions to this topic in the future.
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RSM-rCCD Optimizing for Paclitaxel Extraction from Taxus chinensis by Natural Deep Eutectic Solvents and Studying Antioxidant Activity
Authors: Ying Guo, Izni Atikah Abd Hamid, Chan Mieow Kee and Jiaxin QuanAvailable online: 09 April 2025More LessIntroductionPaclitaxel from Taxus chinensis contains medicinal properties to treat various cancer diseases. Thus, extracting paclitaxel from Taxus chinensis had aroused a wide of research interests.
MethodsUltrasonic-assisted extraction (UAE) has high extraction efficiency, and natural deep eutectic solvents (NADESs) have the advantages of being green, natural, and non-toxic. As a result, the UAE-NADES were introduced to extract paclitaxel from Taxus chinensis. The ideal NADES composed of choline chloride and malic acid was achieved at a molar ratio of 1:1, with the optimal extraction parameters identified through single-factor experiments. Response Surface Methodology of rotatable Central Composite Design (RSM-rCCD) was applied to further optimize the extraction conditions.
ResultsThe ultimate optimum circumstances of ultrasonic power is 240 W, extraction time is 49 min, solid/liquid ratio is 1:18, extraction temperature is 38°C, and the maximum extraction yield reached 5.94 mg/g. Their IC50 values of paclitaxel extract for free radicals of DPPH (2,2-diphenyl-1- picrylhydrazyl), ABTS (2,2’-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid)) and OH (Hydroxyl) were 20.53, 40.79 and 270.98 mg/L, respectively.
DiscussionCompared with traditional solvents, NADES has higher extraction efficiency and yield for paclitaxel from Taxus chinensis.
ConclusionThis article demonstrates the increased extraction yield of paclitaxel, which has strong antioxidant activity.
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Effects of Two Types of Biochars on Tungsten (W) Toxicity and Subcellular Distribution of W in Rice Plants (Oryza Sativa L.)
Authors: Honghong Li, Ping Yu, Yihan Huang, Xinying Yang, Yixian Huang and Zhou LiAvailable online: 17 March 2025More LessIntroductionSoils in the vicinity of tungsten mining operations frequently experience contamination with multiple metals. Current literature indicates that remediation strategies have predominantly concentrated on the bioavailability of heavy metals within these soils. However, the bioavailability of tungsten itself has not been sufficiently addressed. Biochar has been shown to contribute to the stabilization of heavy metals; however, research on the bioavailability of tungsten (W) in soil is limited.
MethodsThis study presents a pot experiment utilizing biochar produced from the corn straw (CB) and beef bone (BB) to investigate its impact on the growth of rice in W-contaminated soil and the bioavailability of W.
ResultsThe results indicated that biochar application enhanced the accumulation of W in rice tissue. Furthermore, the enhancement effect of biochar derived from BB on W in rice shoots and roots was greater than that of CB. This effect can be attributed to several factors. First, the application of biochar raised the soil pH, which in turn increased the mobility of W in alkaline conditions. Consequently, the concentrations of W in the acid-soluble and reducible fractions were elevated, improving the bioavailability of tungsten. Moreover, our study demonstrated that biochar significantly reduced the soil redox potential (Eh) (P < 0.01), with a pronounced negative correlation between the Eh values and the proportion of W in the acid-soluble and reducible fractions. This finding suggests that the reduction in soil Eh facilitated the mobilization of W. The W content in rice roots was positively correlated with the acid-soluble and reducible W in the soil, indicating that biochar application increased the root concentration of tungsten. Furthermore, biochar treatment resulted in a decrease in the proportion of tungsten bound to the root cell walls and an increase in its distribution within the vacuoles and cytoplasm. This redistribution promoted the translocation of tungsten from the roots to the shoots, thereby elevating the tungsten content in the aboveground plant biomass.
ConclusionBiochar application enhanced the translocation of W from roots to shoots, resulting in an increased concentration of tungsten in the aboveground plant biomass. Notably, the biochar produced from beef bone exhibited a more pronounced effect on the accumulation of W in rice shoots and roots compared to that derived from corn straw. Thus, the application of biochar is not recommended for soils contaminated with multiple heavy metals surrounding tungsten mineral deposits, as it may potentially increase the risk of tungsten pollution in the soil. Conversely, biochars are valuable for enhancing the phytoextraction capacity of plants, offering potential strategies for the remediation of tungsten-contaminated soils.
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Characterization of the Chemical Components of Pedicularis kansuensis Maxim Using Ultra-high-performance Liquid Chromatography Coupled to Quadrupole‐Time‐of‐Flight Tandem Mass Spectrometry
Authors: Xianhua Wen, Ang Li, Tsering, Qunfang Zhang, Renqingjia and Songhong YangAvailable online: 06 March 2025More LessBackgroundPedicularis kansuensis Maxim. is a commonly used Tibetan medicine that has been used for a long time to clear heat and detoxify, remove dampness and diuresis, treat sores, and nourish. It has favorable biological activities such as anti-inflammatory, antioxidant, and anti-fatigue. However, to date, only a handful of studies have utilized traditional separation and purification methods to investigate the chemical constituents of Pedicularis kansuensis Maxim. This scarcity of comprehensive and systematic research on its chemical composition impedes the further exploration of its biological activity and clinical applications.
ObjectiveIt is imperative to develop an effective, dependable, and expeditious methodology for the systematic analysis and comprehensive characterization of the diverse chemical constituents found in Pedicularis kansuensis Maxim through cracking pathways and patterns.
MethodsThis study used negative ion mode UHPLC-QTOF-MS/MS and 8 reference standards to comprehensively investigate the collision-induced dissociation tandem mass spectrometry (CID-MS/MS) fragmentation pathway of chemical components in Pedicularis kansuensis Maxim. A method based on ultra-high performance liquid chromatography and quadrupole time-of-flight mass spectrometry combined with data analysis software was established for screening and identifying targeted and non-targeted components of Pedicularis kansuensis Maxim.
ResultsA total of 150 compounds were identified in Pedicularis kansuensis Maxim, including 43 acylglucoside, 36 iridoid glycosides, 19 lignans, 41 flavonoids, and 11 other compounds.
ConclusionThis research has meticulously crafted an efficient and comprehensive methodology for the detection of intricate compounds. It has been successfully implemented in the analysis and identification of chemical constituents within Pedicularis kansuensis Maxim, thereby laying a solid foundation for further in-depth exploration of this species. Moreover, this work serves as a valuable reference for the study of other traditional Chinese medicinal herbs.
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