Current Drug Discovery Technologies - Volume 22, Issue 6, 2025
Volume 22, Issue 6, 2025
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Targeted Management: Unlocking the Crucial Role of PROTACs in Cancer Treatment
Authors: Priyanka Gupta, Sumit Dutta, Prashant Kumar, Monika Kaushik, Sumel Ashique and Mithun BhowmickTargeted Protein Degradation (TPD) offers a solution, eliminating disease-related proteins and overcoming challenges associated with unintended toxicity and lack of precision. PROTACs (Proteolysis Targeting Chimeras) represent an innovative strategy for the specific degradation of target proteins through the UPS (Ubiquitin-Proteasome System). In comparison to conventional protein inhibitor medications, PROTAC offers advantages in terms of efficacy, selectivity, and the ability to overcome drug resistance in cancer treatment, contributing novel perspectives to the field of anti-cancer drug discovery. Proteins play vital roles in an organism’s health, and misfolded contributes to diseases like neurodegenerative disorders and cancer. Cells maintain protein balance through quality control systems, primarily the UPS and autophagy. PROTAC, a Targeted Protein Degradation (TPD) strategy, utilizes UPS, employing small molecules to induce targeted protein degradation. PROTAC exhibits promise in preclinical studies and clinical trials for diverse cancers. Notable examples include breast cancer, where PROTAC targets CDK4/6 (cyclin-dependent kinase) and Estrogen Receptors (ER), prostate cancer, addressing Androgen Receptor (AR) degradation, hematologic malignancies, focusing on AURORA-A and CDKs, and NSCLC (Non-Small-Cell Lung Cancer), targeting Estimated Glomerular Filtration Rate (EGFR), and KRAS. Despite their potential, PROTAC faces challenges, including compensatory protein expression in response to targeted therapies. This comprehensive review explores recent advancements in PROTAC and related technologies, emphasizing the mechanisms and structures of PROTAC and their applications in proteins targeting cancer.
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Structure-based Virtual Screening and Hit Identification of Novel designed Quinazolin-4(3H)-one Derivatives as Antitubercular Agent against Targets Polyketide Synthase 13 and DNA gyrase of Mycobacterium tuberculosis
Authors: Revathi Gnanavelou, Sowmiya Perinbaraj and Konda Reddy GirijaIntroductionAfter COVID-19, tuberculosis remained the world's second most infectious fatal disease in 2022, with about 410 million people developing MDR TB, according to WHO. The fast increase of MDR and XDR-TB has posed a significant clinical problem in tuberculosis treatment. Bedaquiline, the first FDA-approved medicine for MDR-TB treatment, has caused cardiotoxicity and hepatotoxicity due to high lipophilicity or hERG potassium channel blockage throughout the last four decades. To overcome medication resistance and toxicity, there is an urgent need to create innovative drugs with improved efficacy against specific enzymes.
MethodsThe work focused on the biological importance of the Quinazoline pharmacophore scaffold, and it involved the virtual screening and development of 180 novel Quinazoline derivatives in order to find potential hit candidates against molecular dual targets (Pks-13 esterase and DNA gyrase). Based on docking scores lower than (-7.5, -7.6 kcal/mol) of the standard compound, 80 drug molecules were screened using AUTODOCK Vina and filtered by ADMET profile. The top five HIT compounds developed with good binding interactions, acceptable ADME features that obeys the Lipinski Rule of Five, and no toxicity produced as compared to standard bedaquiline were chosen.
Results and DiscussionDocking scores showed that compound RBSI64 had a substantial binding affinity against dual targets (-11.6, -8.2 kcal/mol) than Bedaquiline (-7.5, -7.6 kcal/mol). MD simulation at 100 ns was carried out to investigate the protein's dynamic behaviour with the standard and ligand complex.
ConclusionThe results indicated that RBSI64 could be a useful template for developing MDR and XDR-TB inhibitors. The current study contributes to the identification of promising antitubercular candidates against targeted enzymes.
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Thymus atlanticus (Ball) Roussine Exerted Anti-Hyperlipidemic, Anti-Hyperglycemic and Hepatoprotective Effects in High-fat and Sucrose Diet-fed Rats
Authors: Hamza Elbouny, Brahim Ouahzizi, Imane Elhassani, Khalid Sellam and Chakib AlemBackgroundCardiovascular disease continues to be a major global health challenge, characterized by high rates of mortality and morbidity. Medicinal plants, rich in bioactive compounds, offer potential avenues for reducing the incidence of cardiovascular disease.
ObjectiveThe objective of this research was to evaluate the efficacy of Thymus atlanticus (T. atlanticus) aqueous extract in preventing hyperlipidemia induced by a high-fat, high-sucrose diet (HFSD) in a rat model.
MethodsMale Wistar rats were divided into three groups (n=5). The first group (normal control group) received a normal basal diet. The second group (HFSD group) received a HFSD containing a normal diet (68.5%), fat (15%), cholesterol (1.5%), and sucrose (15%). The third group (HFSD treated with thyme extract) received the HFSD and was administered orally with T. atlanticus extract (500 mg/kg bw). After 8 weeks, blood and liver samples were taken for biochemical analysis.
ResultsThe results showed that HFSD intake elevated plasmatic lipids, blood fasting glucose, hepatic biochemical parameters, and inflammation. Moreover, HFSD resulted in increased liver weight, hepatic lipids, and oxidative stress. However, the treatment with T. atlanticus extract attenuated the altered parameters by lowering or restoring the levels of plasmatic lipids (TGs: -12.21%; LDL-C: -21.49%), glycated hemoglobin (-23.33%), hepatic parameters (AST: -25.04%; ALT: -10.42%; ALP: -42.81%), and inflammation. Additionally, thyme extract reduced the levels of hepatic lipids (TGs: -21.13%; TC: -12.77%) and ameliorated hepatic oxidative status by reducing malondialdehyde levels (-10.87%) and enhancing the antioxidant effect (+25.71%) of hepatic extract.
ConclusionWe conclude that the traditionally used aqueous extract of T. atlanticus protected against the detrimental effects of HFSD intake, and its supplementation would be an effective strategy to protect the liver and cardiovascular system. While promising, these benefits need to be validated through clinical trials.
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Design of Potent Telomerase Inhibitors using Ligand-based Approaches and Molecular Dynamics Simulations Studies
Authors: Shalini Bajaj, Manikanta Murahari and Mayur Yergeri ChandraIntroductionTelomerase is a well-recognised and a promising target for cancer therapy. In this study, we selected ligand-based approaches to design telomerase inhibitors for the development of potent anticancer agents for future cancer therapy.
MethodsTo investigate the chemical characteristics required for telomerase inhibitory activity, a ligand-based pharmacophore model of oxadiazole derivatives reported from the available literature was generated using the Schrodinger phase tool. This selected pharmacophore hypothesis is validated by screening a dataset of reported oxadiazole derivatives. The pharmacophore model was selected for virtual screening using ZINCPharmer against the ZINC database. The ZINC database molecules with pharmacophore features similar to the selected pharmacophore model and good fitness score were taken for molecular docking studies. With the pkCSM and SwissADME tools we predicted the pharmacokinetic and toxicity of top ten ZINC database compounds based on docking score, binding interactions and identified two in-silico potential compounds with good absorption, distribution, metabolism, and less toxicity. Then both the hit molecules were exposed to molecular dynamic simulation integrated with MM-PBSA binding free energy calculations using GROMACS tools.
ResultsThe generated pharmacophore model displayed five features, two hydrophobic and three aromatic rings. The MM-PBSA calculations exhibited that the free binding energy of selected protein-ligand complexes were found stable and stabilized with non-polar and van-der walls free energies.
ConclusionOur study suggests that ZINC82107047 and ZINC8839196 can be used as hit molecules for future biological screening and for discovery of safe and potent drugs as telomerase inhibitors for cancer therapy.
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Effective Integration of Artificial Intelligence and Blockchain Technologies for Empowerment of Drug Discovery and Development
Authors: Virendra S. Gomase, Devendra L. Visokar and Vitthal V. ChopadeThe effective integration of blockchain technology and artificial intelligence (AI) has the potential to change healthcare management. Two cutting-edge developments in the healthcare industry are blockchain and artificial intelligence. Blockchain, an open network for information sharing and permission, is being used in e-Health to apply artificial intelligence models. Healthcare workers will be able to view patient medical records on the blockchain. Artificial intelligence (AI) makes use of a wide range of suggested algorithms, decision-making power, and vast amounts of data. Health care services can be made more decentralized, transparent, safe, and impenetrable with the use of blockchain technology. AI needs cryptographic records to be stored, and blockchain makes this possible. Applications of artificial intelligence in healthcare management include chatbots for diagnosis and treatment, predictive analytics, personalized medicine, and more. Blockchain technology has applications in supply chain management, clinical trial management, interoperability, and data security and integrity in healthcare management. A more effective, safe, and patient-centered healthcare ecosystem can be created by integrating blockchain technology and artificial intelligence (AI) into healthcare management. It can encourage the development of a wide range of applications in radiology, cancer treatment, cardiology, dermatology, and fundoscopy that may save patients' lives.
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Biological Activity and Therapeutic Potential of Coumarin Derivatives: A Comprehensive Review
Authors: Shristi Singh, Niranjan Kaushik, Ajita Paliwal, Mridul Singh Sengar and Deepika PaliwalCoumarins, naturally occurring benzopyrones, have garnered significant attention due to their diverse pharmacological activities and therapeutic potential. Derived from natural sources and synthetic routes such as the Perkin and Pechmann reactions, these compounds exhibit a broad spectrum of biological activities, including antioxidant, anti-inflammatory, antimicrobial, anticancer, antidiabetic, and neuroprotective effects. The structure-activity relationship of coumarins highlights the critical role of substitutions at specific positions on the benzopyrone ring, enhancing their efficacy and selectivity. Notable applications include anticancer activities, with coumarin derivatives inhibiting tumor growth and inducing apoptosis in breast cancer and melanoma cells, and neuroprotection, particularly in Alzheimer's and Parkinson’s diseases, through acetylcholinesterase inhibition and β-amyloid modulation. Additionally, coumarins show promise in combating drug-resistant pathogens and oxidative stress. Despite their potential, challenges such as toxicity and bioavailability remain. Future research should focus on optimizing coumarin scaffolds and advancing clinical evaluations to establish their role as next-generation therapeutic agents.
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Techniques and Strategies for Engineering Vaccine Adjuvants: A Comprehensive Review
Authors: Suman Sharma, Rajani Chauhan, Qumar Negar and Pragya SharmaVaccines are biological products used to prevent diseases and ailments caused by viruses, bacteria, and fungi. Vaccine adjuvants increase the potency of the vaccine. The vaccine adjuvants like gold nanoparticle, silver nanoparticle, Lentinan-calcium carbonate microsphere, Aluminium nano metal-organic framework, Poly[di(carboxylatomethylphenoxy)phosphazene] macromolecule, lignin nanoparticle, nanostructured hydroxy phosphate synthesized by chemical and biosynthesis and their evaluation method have been discussed. Evaluations for physical parameters like particle size and biological evaluation to find out the potency of adjuvants have been discussed. The adjuvant synthesis discussed is a potential method for improvement of the marketed vaccine.
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Darunavir: A Versatile Protease Inhibitor against Microbial Infections
Authors: Mridul Singh Sengar, Kalpana Rahate and Megha VermaMicrobial infections continue to pose significant threats to global health, necessitating the development of innovative therapeutic strategies. One promising avenue is the use of protease inhibitors, with darunavir (DRV) emerging as a potent candidate in the field. Designed to combat resistance to standard HIV therapy, DRV is a second-generation protease inhibitor. Regarding microbial infections, this study sheds light on the internal processes behind the impact of DRV within cells. Novel protease inhibitor DRV targets essential proteolytic enzymes that are essential for microbial survival and growth in order to achieve its antimicrobial actions. By interfering with the proteolytic digestion of important microbial proteins, its inhibitory effect prevents infectious particles from being assembled and maturing. DRV is a viable treatment option for microbial infections as its selective suppression reduces the possibility of off-target consequences. DRV efficiently penetrates the intracellular milieu of host cells, where it prevents the proteolytic cleavage of vital viral and bacterial proteins, hence combating pathogenic infections. Microbial infections may be treated in a variety of ways using DRV as it disrupts the cycle of pathogen reproduction. The present review explores the molecular principles behind the effectiveness of DRV against microbial infections, emphasizing the drug's ability to fight a wide range of pathogens. The comprehension of the intracellular activity of DRV is promising for the creation of novel treatment approaches, providing encouragement in the continuous fight against microbial diseases.
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In silico Development and Characterization of Nisoldipine Analogues for Enhanced Solubility and Therapeutic Potential in the Treatment of Angina Pectoris
Authors: Pavankumar Krosuri and Mothilal MohanIntroductionAngina pectoris, a common cardiovascular condition, necessitates the development of effective therapeutic agents. Nisoldipine, a calcium channel blocker, and its analogues have shown potential in treating this condition. However, the optimization of these compounds for enhanced therapeutic efficacy remains a critical challenge.
ObjectiveThis study aimed to investigate the therapeutic potential of Nisoldipine analogues through in silico analysis, with the goal of identifying lead compounds for the treatment of angina pectoris and optimizing their formulation for improved solubility and drug release.
MethodsEighteen Nisoldipine derivatives were screened using in silico techniques, including molecular docking, SWISS ADME analysis, and molecular dynamics (MD) simulations. The top candidate, ZINC26826387, was identified and further analyzed. A comprehensive gene set analysis was performed using OMIM, GeneCards, and STITCH databases to identify target hub genes associated with angina pectoris. PPI network analysis and CytoHubba ranking were used to prioritize key genes for further study. Additionally, the lead compound was optimized through nanoparticle formulation, and the resulting nanoparticle tablets were characterized for solubility, dissolution, particle size, entrapment efficiency, and zeta potential. ANOVA was used to analyze the characterization data.
Results and DiscussionZINC26826387 emerged as the most promising Nisoldipine analogue, exhibiting superior solubility, absence of AMES toxicity, strong molecular docking interaction with the target protein (docking score of -8.0 kcal/mol), and favourable pharmacokinetic properties. MD simulation confirmed the stability of the ligand-receptor complex. The study also identified 88 target hub genes associated with angina pectoris, with PTGS2 prioritized as a key gene. The nanoparticle formulation of ZINC26826387 significantly enhanced solubility by 2.53-fold compared to the unformulated compound. The optimized nanoparticle tablets achieved a 98.53% drug release within 30 minutes, with an average particle size of 50 nm, entrapment efficiency of 98.89%, and zeta potential of -52 mV, indicating good stability and uniformity.
ConclusionThe study demonstrates the therapeutic potential of ZINC26826387, a Nisoldipine analogue, through its enhanced solubility and reduced crystallinity. The lead compound was made into Nanoparticles using Pluronic F407 as carrier. These nanoparticles were further formulated to oral disintegrating tablets for rapid drug release, good stability compared to conventional tablets. These findings suggest that ZINC26826387 could be a promising candidate for the treatment of angina pectoris.
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Cannabigerol and Cannabinoid Receptors in Major Depressive Disorder: Network Pharmacology, Molecular Docking, and In-vivo Analysis
IntroductionCannabigerol (CBG), being one of the non-psychotropic phyto-cannabinoid, has been labelled and recognized to be antioxidant and neuroprotective; it may conceivably hold depression-relieving activity. Consequently, the objective of the present research procedure was to explore the depression-alleviating competence of cannabigerol in both stressed and unstressed mice using computational/in-silico modelling, followed by in-vivo analysis.
MethodsTarget genes for Major Depressive Disorder (MDD) were identified using GeneCards and Swiss Target Prediction, with common targets screened via Venny software. STRING database analysis established protein-protein interactions (PPI), identifying CNR2 (CB2 receptor) as a key target. Molecular docking of CBG with CB2 (PDB ID: 8GUR) showed strong binding, prompting in-vivo evaluation. ADME profiling via Schrödinger Maestro v10.5 confirmed CBG’s high oral absorption and favorable pharmacokinetics. Male Swiss albino mice underwent chronic unpredictable mild stress (CUMS) for three successive weeks, with CBG (10, 20, 40 mg/kg) and imipramine (15 mg/kg) administered and various behavioral and biochemical parameters being analyzed.
Results and DiscussionCannabigerol demonstrated maximum oral absorption in ADME predictions using Schrödinger's Maestro (v10.5). Wayne diagram illustrated MDD-related targets, with CB2 (CNR2) rankings in top targets, based on SwissADME and Venny software analysis. Docking analysis revealed a high binding affinity (-10.53) for CB2, outperforming cannabidiol (-9.56) and comparable to Δ9-THC (-10.11). During in-vivo evaluation, CBG (40 mg/kg) and Imipramine 15 mg/kg significantly reduced CUMS-induced exalted plasma corticosterone, nitrite quantities, and monoamine oxidase-A action in the brain of stressed mice. Additionally, both treatments substantially reversed the unpredictable chronic stress-induced decline in catalase action, demonstrating CBG’s possible potential in alleviating depression-like symptoms in mice.
ConclusionCannabigerol has shown significant depressive alleviating potential in mice exposed to chronic and unpredictable stress regimes, possibly via interaction with cannabinoid receptors as indicated by in-silico modelling, which has been validated by our findings of the in-vivo protocol.
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An In-silico Investigation of the Potential of Vitamin D as a 5-HT1A Receptor Agonist: A Molecular Modeling Approach for Evaluating its Pharmacological Prospects
Authors: Houda Filali, Mohammed Mouhcine, Ibtihal Segmani, Youness Kadil, Imane Rahmoune and Mohamed AgoubIntroductionVitamin D plays a crucial role in maintaining muscle and bone health and has been increasingly implicated in neurological disorders, including depression and anxiety, which are conditions closely associated with dysregulation of the serotonin 1A receptor (5-HT1A receptor). This study employs molecular modeling techniques to investigate the potential agonistic activity of Vitamin D on the 5-HT1A receptor. Additionally, it seeks to elucidate the key structural motifs and molecular interactions that underline the binding affinity between Vitamin D and the receptor. The insights gained from this research may inform the design of Vitamin D-derived compounds with optimized pharmacological profiles, contributing to therapeutic advancements in related neurological conditions.
MethodsWe selected five structures of the 5-HT1A receptor (PDB IDs: 7E2Y, 7E2Z, 8W8B, 8JSP, and 8JT6) for Protein-Ligand Interaction Fingerprint (PLIF) analysis. We conducted molecular docking to evaluate the binding efficiency of two forms of Vitamin D, ergocalciferol and cholecalciferol, to the 5-HT1A receptor. Following this, we performed Molecular Dynamics (MD) simulations to assess the stability of these interactions.
Results and DiscussionDocking results revealed binding energies below -6.64 kcal/mol for both forms of Vitamin D, with ergocalciferol achieving a maximum binding energy of -7.78 kcal/mol. ASP116 emerged as a pivotal residue in stabilizing these interactions. MD simulations indicated that the Vitamin D-5-HT1A complexes exhibited stability comparable to the serotonin-bound 5-HT1A receptor complex.
ConclusionOur study suggests that Vitamin D may function as an agonist for the 5-HT1A receptor, with ASP116 playing a critical role in binding. Yet, further in vitro and in vivo studies are necessary to validate these findings and explore the therapeutic potential of Vitamin D-derived compounds.
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Superfoods in Drug Discovery: Nutrient Profiles and their Emerging Health Benefits
Authors: Ravi Kumar Mittal, Vikram Sharma and Gaurav KrishnaIntroductionSuperfoods' nutritional characteristics and health benefits have garnered attention recently. These foods contain vitamins, minerals, flavonoids, and polyphenols, which prevent disease and promote health. This review examines the nutritional and therapeutic properties of amla, maca, jackfruit, Brazil nuts, and goji berries. Recent study highlights their role to mitigate chronic diseases like diabetes, heart disease, dementia, and cancer.
ObjectiveThis extensive review aims to cover the health and nutritional benefits of su-perfoods. It also discusses the macro- and micronutrients of amla, maca, jackfruit, Brazil nuts, and goji berries. Additionally, we explore the potential of superfoods to protect against chronic diseases, including diabetes, cardiovascular disease, cognitive decline, and cancer.
MethodsA comprehensive investigation was carried out to find published literature using Web of Science, PubMed, and Scopus. In addition to Boolean operators (AND, OR), keywords such as “superfood,” “bioactive compounds”, “functional foods”, and “health benefits” were integrated. Superfoods, their bioactive ingredients, and potential health benefits based on preclinical or clinical data were the subject of permitted research. Research on isolated or synthesized substances unrelated to superfoods, articles without experimental data, and non-peer-reviewed databases were excluded.
Results and DiscussionOur research reveals that superfoods include health-promoting phytochemicals, carotenoids, flavonoids, and polyphenols. They may prevent diseases like diabetes, cardiovascular disease, cancer, and obesity. In conclusion, superfoods improve health and wellness in numerous ways.
ConclusionSuperfoods prevent chronic illnesses and improve health. This review discusses the nutritional content and health advantages of superfoods, which may encourage their consumption. More research is needed to promote global health and wellness using superfoods.
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Volumes & issues
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Volume 22 (2025)
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Volume 21 (2024)
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Volume 20 (2023)
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Volume 19 (2022)
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Volume 18 (2021)
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Volume 17 (2020)
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Volume 16 (2019)
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Volume 15 (2018)
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Volume 14 (2017)
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Volume 13 (2016)
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Volume 12 (2015)
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Volume 11 (2014)
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Volume 10 (2013)
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Volume 9 (2012)
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Volume 8 (2011)
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Volume 7 (2010)
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Volume 6 (2009)
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Volume 5 (2008)
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Volume 4 (2007)
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Volume 3 (2006)
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Volume 2 (2005)
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Volume 1 (2004)
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