Current Protein and Peptide Science - Volume 18, Issue 10, 2017

The primary contact between the fungal phytopathogen Botrytis cinerea and its host takes place at the cell surface of both organisms. The fungal cell wall is generally composed of an inner skeletal layer consisting of various polysaccharides surrounded by a layer of glycoproteins. Some of these glycoproteins have structural or enzymatic functions, or are involved in conidial adhesion. After landing on the host surface and sensing appropriate signals, B. cinerea conidia produce a germ tube and secrete phytotoxic fungal metabolites and cell wall-degrading enzymes (CWDEs), facilitating host penetration. In fact, 118 genes encoding putative Carbohydrate-Active Enzymes (CAZymes) have been identified in the B. cinerea genome. This large enzymatic repertoire could explain, at least in part, the ability of B. cinerea to infect a vast number of plant species. In recent years, several genes and signaling factors have been identified as playing key roles in pathogenesis, particularly in appressorium formation and penetration. These include the NOX Complex, MAPK cascades, heterotrimeric G proteins, histidine kinases and cAMP signaling pathways. Some of these pathways could also be responsible for controlling the expression and secretion of CWDEs and/or secondary metabolites during infection. Herein, putative virulence factors that are linked to the cell wall, as well as recentlydescribed genes and components that allow the sensing of environmental cues, are highlighted.

All living organisms are subject to changing environments, which must be sensed in order to respond swiftly and efficiently. Two-component systems (TCS) are signal transduction regulatory circuits based typically on a membrane bound sensor kinase and a cytoplasmic response regulator, that is activated through a histidine to aspartate phosphorelay reactions. Activated response regulator acts usually as a transcription factor. The best known examples were identified in bacteria, but they are also found in fungi, algae and plants. Thus far, they are not found in mammals. Regulatory circuits coupled to two-component systems exhibit a myriad of responses to environmental stimuli such as: redox potential, pH, specific metabolites, pressure, light and more recently to specific antimicrobial peptides that activate a sensor kinase responsible for expressing virulence factors through the active response regulator. In this review we explore general aspects on two-component systems that ultimately can play a role on virulence regulation, also the intriguing domain properties of the sensor kinases that can be a potential target for antimicrobial compounds. Only a handful of sensor kinases are extensively characterized, the vast majority belong to what we call ‘the dark matter of bacterial signal transduction’ since no known signal, structure and biochemical properties are available. Regulatory circuits from vertebrate pathogenic organisms can explain virulence in terms of either response to environmental factors or specific niche occupancy. Hopefully, knowledge on these signal transduction systems can lead to identify novel molecules that target two-component systems, since the increase of drug resistant microorganisms is worrisome.

The Colletotrichum genus has been considered as one of the top 10 fungal pathogens in molecular plant pathology based on their scientific and agrobiological importance. Although the genus contains species with different lifestyles, most of the Colletotrichum sp. are known by their hemibiotrophic strategy of infection/invasion causing anthracnose disease in many economically important crops. Hemibiotrophy includes two sequential stages of infection, biotrophy and necrotrophy, in a series of steps that involve the participation of different virulence factors. In this review, we present the current status of the knowledge of such factors reported in this genus and a list of related genes identified in Colletotrichum sp. genomes.

The plant cell wall is always the physical barrier in which phytopathogenic fungi must overcome by producing an array of cell wall degrading enzymes (CWDEs) that allow them to invade host tissues through the degradation of cell wall components of plants. Magnaporthe oryzae is a causal agent of blast disease, one of the most devastating disease in rice resulting significant crop losses worldwide. The penetration of plant cuticle and cell walls induced by infection structures of M. oryzae has been known to be acquired by the association of turgor pressure and CWDEs for successful infection of M. oryzae. In this review, we focus on recent discoveries of M. oryzae CWDEs, gene regulation and their biological roles as fungal virulence factors and elicitors of host defense response leading to plant resistance against fungal pathogens.

The number of protein folds in nature is limited, thus is not surprising that proteins with the same fold are able to exert different functions. The cysteine protease inhibitors that adopt an immunoglobulin- like fold (Ig-ICPs) are inhibitors encoded in bacteria and protozoan parasites. Structural studies indicate that these inhibitors resemble the structure of archetypical proteins with an Ig fold, like antibodies, cadherins or cell receptors. The structure of Ig-ICPs from four different protozoan parasites clearly shows the presence of three loops that form part of a protein-ligand interaction surface that resembles the antigen binding sites of antibodies. Thus, Ig-ICPs bind to different cysteine proteases using a tripartite mechanism in which their BC, DE and FG loops are responsible for the main interactions with the target cysteine protease. Ig-ICPs from different protozoan parasites regulate the enzymatic activity of host or parasite's proteases and thus regulate virulence and pathogenesis.

The prevalence of Candida parapsilosis, an opportunistic human pathogenic fungal species, is increasing at an alarming rate in the hospital environment. Patients at risk for C. parapsilosis infection include those with immunosuppression, such as individuals with cancer, AIDS, and low birth weight premature neonates as well as patients that had undergone abdominal surgery. Neonatal candidiasis caused by C. parapsilosis has been widely reported across the globe. Various reports have shown that, compared to other Candida species, certain C. parapsilosis clinical isolates were less susceptible to antifungals such as amphotericin B, fluconazole, and caspofungin. In addition, some studies have even reported multi-echinocandin or multi-azole resistant strains of C. parapsilosis. C. parapsilosis has several virulence factors that contribute to its capacity for host invasion and among these factors extracellular lipases have a major role in pathogenesis. In this review we have collected all the recent relevant studies that confirm the involvement of secreted lipases in C. parapsilosis pathogenesis, using both in vitro and in vivo models of infection. Of particular note, an available lipase deficient C. parapsilosis strain has been utilized to demonstrate that the lack of secreted lipases decreased virulence, reduced tissue damage, and was less able to survive within phagocytes or mice compared to the wild type. Since fungal secreted lipases have different characteristics than lipolytic enzymes present in humans, C. parapsilosis extracellular lipases may be potential targets for the development of novel antifungal drugs.

Candida species are the major opportunistic human pathogens accounting for 70-90% of all invasive fungal infections. Candida spp, especially C. albicans, are able to produce and secrete hydrolytic enzymes, particularly aspartic proteases (Saps). These enzymes production is an evolutionary adaptation of pathogens to utilize nutrients and survive in host. Sap1-10 are believed to contribute to the adhesion and invasion of host tissues through the degradation of cell surface structures. Aspartic proteases control several steps in innate immune evasion and they degrade proteins related to immunological defense (antibodies, complement and cytokines), allowing the fungus to escape from the first line of host defense. The existing ways to identify potential drug targets rely on specific subset like virulence genes, transcriptional and stress response factors. Candida virulence factors like Sap isoenzymes can be pivotal targets for drug development. The identification of mechanism of a non-canonical inflammasome exerted by Saps could open novel therapeutic strategies to dampen hyperinflammatory response in candidiasis.