Skip to content
2000
Volume 25, Issue 8
  • ISSN: 1871-5265
  • E-ISSN: 2212-3989

Abstract

Introduction

There are several diagnostic techniques for detecting , the most common of which are upper GI endoscopic biopsies and stool specimens as optimal samples. The goal of this study was to detect and compare infection using the following techniques: rapid urease test (RUT), polymerase chain reaction (PCR), culture, histopathology, and stool antigen test (SAT), as well as to assess their validity in detecting infection.

Methodology

Patients with dyspepsia who presented to the Department of Gastroenterology's Outpatient Department and In-Patient Department between September 2021 and December 2022 were screened (Rome IV criteria). Endoscopy was used to diagnose and recruit patients with Functional dyspepsia (FD) and Peptic ulcer disease (PUD). Each biopsy sample was subjected to a battery of microbiological testing. Patients were considered infected with if any three of five tests were found to be positive. The outcomes of all diagnostic modalities were documented and analysed.

Results and Discussion

A total of 171 patients were enrolled; the majority of them were male (62.60%), with a median age of 43 years. In 120 cases (70.18%), was identified. The RUT showed the following results: sensitivity, specificity, positive predictive value, negative predictive value, and accuracy: 91.67%, 74.51%, 89.43%, 79.17%, and 86.55%; PCR (ureC gene): 91.67%, 100%, 100%, 83.61%, and 94.15%; Histopathology: 61.67%, 100%, 100%, 52.58%, and 73.10%; and SAT: 87.50%, 94.12%, 97.22%, 76.19%, and 89.47%, respectively.

Conclusion

The present study sheds light on the various diagnostic modalities and their efficacy in detecting infection. Since several diagnostics are available for detecting infection, the question of which method to use arises. Thus, the sensitivity, specificity, availability, rapidity in obtaining results, and availability of the test, with added value such as detection of pathogenic qualities, must all be considered.

Loading

Article metrics loading...

/content/journals/iddt/10.2174/0118715265353431250604133427
2025-06-13
2026-01-05
Loading full text...

Full text loading...

References

  1. MahadevaS. GohK.L. Epidemiology of functional dyspepsia: A global perspective.World J. Gastroenterol.200612172661266616718749
    [Google Scholar]
  2. WarrenJ.R. MarshallB. Unidentified curved bacilli on gastric epithelium in active chronic gastritis.Lancet198318336127312756134060
    [Google Scholar]
  3. MaedaS MentisAF Pathogenesis of Helicobacter pylori infection.Helicobacter200712s1104(Suppl. 1)10.1111/j.1523‑5378.2007.00529.x17727454
    [Google Scholar]
  4. MossS.F. MalfertheinerP. Helicobacter and gastric malignancies.Helicobacter200712s1233010.1111/j.1523‑5378.2007.00539.x17727457
    [Google Scholar]
  5. McGeeD.J. MobleyH.L.T. Pathogenesis of Helicobacter pylori infection.Curr. Opin. Gastroenterol.2000161243110.1097/00001574‑200001000‑0000517024012
    [Google Scholar]
  6. FikreeA. ByrneP. Management of functional gastrointestinal disorders.Clin. Med.2021211445210.7861/clinmed.2020‑098033479067
    [Google Scholar]
  7. DasJ.C. PaulN. Epidemiology and pathophysiology of Helicobacter pylori infection in children.Indian J. Pediatr.200774328729010.1007/s12098‑007‑0046‑617401270
    [Google Scholar]
  8. ParkinD.M. PisaniP. FerlayJ. Global cancer statistics.CA Cancer J. Clin.19994913364
    [Google Scholar]
  9. HuntR.H. XiaoS.D. MegraudF. Helicobacter pylori in developing countries.J. Gastrointestin. Liver Dis.201120329930421961099
    [Google Scholar]
  10. CheyW.D. LeontiadisG.I. HowdenC.W. MossS.F. ACG Clinical guideline: Treatment of Helicobacter pylori infection.Am. J. Gastroenterol.2017112221223910.1038/ajg.2016.56328071659
    [Google Scholar]
  11. MégraudF LehoursP Helicobacter pylori detection and antimicrobial susceptibility testing.Clin Microbiol Rev200720228032210.1128/CMR.00033‑06.17428887PMC1865594
    [Google Scholar]
  12. DixonM.F. GentaR.M. YardleyJ.H. CorreaP. Classification and grading of gastritis. The updated Sydney System. International Workshop on the Histopathology of Gastritis, Houston 1994.Am. J. Surg. Pathol.1996201011611181
    [Google Scholar]
  13. KhalifehgholiM. ShamsipourF. AjhdarkoshH. Comparison of five diagnostic methods for Helicobacter pylori.Iran. J. Microbiol.20135439640125848511
    [Google Scholar]
  14. SaikiR.K. ScharfS. FaloonaF. MullisK.B. HornG.T. ErlichH.A. ArnheimN. Enzymatic amplification of β-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.Science1985; Dec 20230473213501354
    [Google Scholar]
  15. ZamaniM. EbrahimtabarF. ZamaniV. Systematic review with meta‐analysis: The worldwide prevalence of Helicobacter pylori infection.Aliment. Pharmacol. Ther.201847786887610.1111/apt.1456129430669
    [Google Scholar]
  16. ShiraniM. PakzadR. HaddadiM.H. The global prevalence of gastric cancer in Helicobacter pylori-infected individuals: A systematic review and meta-analysis.BMC Infect. Dis.202323154310.1186/s12879‑023‑08504‑537598157
    [Google Scholar]
  17. SinghV. TrikhaB. NainC.K. SinghK. VaipheiK. Epidemiology of Helicobacter pylori and peptic ulcer in India.J. Gastroenterol. Hepatol.200217665966510.1046/j.1440‑1746.2002.02746.x12100610
    [Google Scholar]
  18. GillH.H. DesaiH.G. MajmudarP. MehtaP.R. PrabhuS.R. Epidemiology of Helicobacter pylori: The Indian scenario.Indian J. Gastroenterol.19931219118330925
    [Google Scholar]
  19. AdlekhaS. ChadhaT. KrishnanP. SumangalaB. Prevalence of Helicobacter pylori infection among patients undergoing upper gastrointestinal endoscopy in a medical college hospital in Kerala, India.Ann. Med. Health Sci. Res.20133455956310.4103/2141‑9248.12210924380008
    [Google Scholar]
  20. RastogiM. RastogiD. SinghS. Prevalence of Helicobacter pylori in asymptomatic paediatrics patients in a tertiary hospital: A cross- sectional study.Int. J. Physiol.2014228010.5958/2320‑608X.2014.00018.3
    [Google Scholar]
  21. AgarwalP. BadkurM. AgarwalR. PatelS. Prevalence of Helicobacter pylori infection in upper gastrointestinal tract disorders (dyspepsia) patients visiting outpatient department of a hospital of North India.J. Family Med. Prim. Care20187357758010.4103/jfmpc.jfmpc_213_1730112312
    [Google Scholar]
  22. SodhiJ.S. JavidG. ZargarS.A. Prevalence of Helicobacter pylori infection and the effect of its eradication on symptoms of functional dyspepsia in Kashmir, India.J. Gastroenterol. Hepatol.201328580881310.1111/jgh.1217823432600
    [Google Scholar]
  23. ClaytonC. KleanthousK. TabaqchaliS. Detection and identification of Helicobacter pylori by the polymerase chain reaction.J. Clin. Pathol.199144651551610.1136/jcp.44.6.5152066432
    [Google Scholar]
  24. ReuseD.H. LabigneA. Mengin-LecreulxD. The Helicobacter pylori ureC gene codes for a phosphoglucosamine mutase.J. Bacteriol.1997179113488349310.1128/jb.179.11.3488‑3493.19979171391
    [Google Scholar]
  25. HoS.A. HoyleJ.A. LewisF.A. Direct polymerase chain reaction test for detection of Helicobacter pylori in humans and animals.J. Clin. Microbiol.199129112543254910.1128/jcm.29.11.2543‑2549.19911723072
    [Google Scholar]
  26. WahabHazrat KhanTilawat AhmadIftikhar JanArif HussainS. ShahHussain El-SalamAbd Detection of H. pylori by PCR method using ureA and ureC gene in gastric biopsy sample.J. Pure Appl. Microbiol.2015921652175
    [Google Scholar]
  27. ShuklaS.K. PrasadK.N. TripathiA. GhoshalU.C. KrishnaniN. NuzhatH. Quantitation of Helicobacter pylori ureC gene and its comparison with different diagnostic techniques and gastric histopathology.J. Microbiol. Methods201186223123710.1016/j.mimet.2011.05.01221624400
    [Google Scholar]
  28. BallalM. ShettyV. BalarajuG. ShettyS. PaiG. LingadakaiR. Helicobacter pylori in dyspepsia: Phenotypic and genotypic methods of diagnosis.J. Glob. Infect. Dis.20179413113410.4103/jgid.jgid_52_1729302146
    [Google Scholar]
  29. MégraudF. Advantages and disadvantages of current diagnostic tests for the detection of Helicobacter pylori.Scand J Gastroenterol199631sup215576210.3109/003655296090945368722384
    [Google Scholar]
  30. LerangF. MoumB. MowinckelP. Accuracy of seven different tests for the diagnosis of Helicobacter pylori infection and the impact of H2-receptor antagonists on test results.Scand. J. Gastroenterol.199833436436910.1080/003655298501709829605257
    [Google Scholar]
  31. UotaniT. GrahamD.Y. Diagnosis of Helicobacter pylori using the rapid urease test.Ann. Transl. Med.201531910.3978/j.issn.2305‑5839.2014.12.0125705641
    [Google Scholar]
  32. ThijsJ.C. ZwetV.A.A. ThijsW.J. Diagnostic tests for Helicobacter pylori: A prospective evaluation of their accuracy, without selecting a single test as the gold standard.Am. J. Gastroenterol.19969110212521298855734
    [Google Scholar]
  33. HusseinR.A. Al-OuqailiM.T.S. MajeedY.H. Detection of Helicobacter pylori infection by invasive and non-invasive techniques in patients with gastrointestinal diseases from Iraq: A validation study.PLoS ONE2021168e0256393
    [Google Scholar]
  34. JalalypourF. FarajniaS. SomiM.H. HojabriZ. YousefzadehR. SaeediN. Comparative evaluation of RUT, PCR and ELISA tests for detection of infection with cytotoxigenic H. pylori.Adv. Pharm. Bull.20166226126610.15171/apb.2016.03627478790
    [Google Scholar]
  35. MalfertheinerP. MegraudF. O’MorainC.A. Management of Helicobacter pylori infection—the Maastricht IV/Florence Consensus Report.Gut201261564666410.1136/gutjnl‑2012‑30208422491499
    [Google Scholar]
  36. LeeH.C. HuangT.C. LinC.L. ChenK.Y. WangC.K. WuD.C. Performance of routine Helicobacter pylori invasive tests in patients with dyspepsia.Gastroenterol. Res. Pract.201320131510.1155/2013/18480624454337
    [Google Scholar]
  37. PourakbariB. GhaziM. MahmoudiS. Diagnosis of Helicobacter pylori infection by invasive and noninvasive tests.Braz. J. Microbiol.201344379579810.1590/S1517‑8382201300500005224516421
    [Google Scholar]
  38. YadavR. SagarM. Comparison of different histological staining methods for detection of Helicobacter pylori infection in gastric biopsy.2022Available from: https://www.cureus.com/articles/105291-comparison-of-different-histological-staining-methods-for-detection-of-helicobacter-pylori-infection-in-gastric-biopsy
    [Google Scholar]
  39. NdipR.N. MacKayW.G. FarthingM.J.G. WeaverL.T. Culturing Helicobacter pylori from clinical specimens: Review of microbiologic methods.J. Pediatr. Gastroenterol. Nutr.200336561662212717085
    [Google Scholar]
  40. SinghA. NarayanJ. SinghS. Helicobacter pylori infection: Challenges in India.J. Pure Appl. Microbiol.201913271572310.22207/JPAM.13.2.07
    [Google Scholar]
  41. GongY.N. LiY.M. YangN.M. Centralized isolation of Helicobacter pylori from multiple centers and transport condition influences.World J. Gastroenterol.201521394495210.3748/wjg.v21.i3.94425624729
    [Google Scholar]
  42. BagirovaM. AllahverdiyevA.M. AbamorE.S. AliyevaH. UnalG. TanalpT.D. An overview of challenges to eradication of Helicobacter pylori infection and future prospects.Eur. Rev. Med. Pharmacol. Sci.20172192199221928537662
    [Google Scholar]
  43. GisbertJ.P. de la MorenaF. AbrairaV. Accuracy of monoclonal stool antigen test for the diagnosis of H. pylori infection: A systematic review and meta-analysis.Am. J. Gastroenterol.200610181921193010.1111/j.1572‑0241.2006.00668.x16780557
    [Google Scholar]
  44. CalikZ. KarameseM. AcarO. Investigation of Helicobacter pylori antigen in stool samples of patients with upper gastrointestinal complaints.Braz. J. Microbiol.201647116717110.1016/j.bjm.2015.11.02226887240
    [Google Scholar]
  45. VeijolaL. OksanenA. LöfgrenT. SipponenP. KarvonenA.L. RautelinH. Comparison of three stool antigen tests in confirming Helicobacter pylori eradication in adults.Scand. J. Gastroenterol.200540439540110.1080/0036552051001215416028433
    [Google Scholar]
  46. WuI.C. WangS.W. YangY.C. Comparison of a new office-based stool immunoassay and (13)C-UBT in the diagnosis of current Helicobacter pylori infection.J. Lab. Clin. Med.2006147314514916503245
    [Google Scholar]
  47. KateV. SubairM. SahooA.K. Prospective evaluation of the diagnostic performance of a new Helicobacter pylori stool antigen immunochromatographic test.J. Mahatma Gandhi Inst. Med. Sci.2019241232710.4103/jmgims.jmgims_32_18
    [Google Scholar]
/content/journals/iddt/10.2174/0118715265353431250604133427
Loading
/content/journals/iddt/10.2174/0118715265353431250604133427
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error
Please enter a valid_number test