An Integrated Rule-Set for Protein Localization in Plasmodium falciparum

Aditya Rao; Sri J. Yeleswarapu; Rajgopal Srinivasan; Gopalakrishnan Bulusu

doi:10.2174/157489308784340685

ISSN: 1574-8936
E-ISSN: 2212-392X

An Integrated Rule-Set for Protein Localization in Plasmodium falciparum
By Aditya Rao, Sri J. Yeleswarapu, Rajgopal Srinivasan and Gopalakrishnan Bulusu
Source: Current Bioinformatics, Volume 3, Issue 2, May 2008, p. 66 - 73
DOI: https://doi.org/10.2174/157489308784340685
- Available online: 01 May 2008

Abstract

Proteins localize to many intracellular and extracellular organelles in the malarial parasite Plasmodium falciparum. Although organellar localization in the parasite has been studied in detail, there is a need for a comprehensive ruleset that captures the different paths and mechanisms used by proteins for localization. This review is an attempt to build such a rule-set through a combination of rules gleaned from literature reports. A prototype localization prediction tool has also been implemented by incorporating certain sequence/composition rules from the rule-set.

Article metrics loading...

/content/journals/cbio/10.2174/157489308784340685

2008-05-01

2025-10-08

From This Site

/content/journals/cbio/10.2174/157489308784340685

dcterms_title,dcterms_subject,pub_keyword

-contentType:Contributor -contentType:Concept -contentType:Institution

10

5

Full text loading...

/content/journals/cbio/10.2174/157489308784340685

Article Type: Research Article

Keyword(s): integrated rule-set; Plasmodium falciparum; protein localization; Targetpf

Most Cited Most Cited RSS feed

- A Review of Ensemble Methods in Bioinformatics
  
  Authors: Pengyi Yang, Yee Hwa Yang, Bing B. Zhou and Albert Y. Zomaya
- Bioinformatics Tools for Mass Spectroscopy-Based Metabolomic Data Processing and Analysis
  
  Authors: Masahiro Sugimoto, Masato Kawakami, Martin Robert, Tomoyoshi Soga and Masaru Tomita
- Distance-based Support Vector Machine to Predict DNA N6- methyladenine Modification
  
  Authors: Haoyu Zhang, Quan Zou, Ying Ju, Chenggang Song and Dong Chen
- A Review on the Recent Developments of Sequence-based Protein Feature Extraction Methods
  
  Authors: Jun Zhang and Bin Liu
- Molecular Genetic Markers: Discovery, Applications, Data Storage and Visualisation
  
  Authors: Chris Duran, Nikki Appleby, David Edwards and Jacqueline Batley
- A Brief Survey of Machine Learning Methods in Protein Sub-Golgi Localization
  
  Authors: Wuritu Yang, Xiao-Juan Zhu, Jian Huang, Hui Ding and Hao Lin
- Cancer Diagnosis Through IsomiR Expression with Machine Learning Method
  
  Authors: Zhijun Liao, Dapeng Li, Xinrui Wang, Lisheng Li and Quan Zou
- The Advances and Challenges of Deep Learning Application in Biological Big Data Processing
  
  Authors: Li Peng, Manman Peng, Bo Liao, Guohua Huang, Weibiao Li and Dingfeng Xie
- Relevance of Molecular Docking Studies in Drug Designing
  
  Authors: Ritu Jakhar, Mehak Dangi, Alka Khichi and Anil K. Chhillar
- Gene Expression Profile Classification: A Review
  
  Authors: Musa H. Asyali, Dilek Colak, Omer Demirkaya and Mehmet S. Inan
More Less

An Integrated Rule-Set for Protein Localization in Plasmodium falciparum

Abstract

Most Read This Month

Most Cited Most Cited RSS feed